Updated on: May 6, 2026
The average Bioinformatics Programmer/analyst in San Jose, CA makes $178,358, 97% above the national average Bioinformatics Programmer/analyst salary of $90,336. This pay is 70% greater than the combined average salaries of other metroes Boston, MA, Las Vegas, NV, and Portland, ME.
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*Data is estimated and depends on the generous anonymous contributions of individuals