Clearance Manager Salary in San Diego, CA.
Updated on: Jan 21, 2026
How much does a Clearance Manager make in San Diego, CA?
The average Clearance Manager in San Diego, CA makes $85,968,
33% above the national average Clearance Manager salary of $64,425.
This pay is 11% greater than the combined average salaries of other metroes San Jose, CA, Tucson, AZ, and Columbus, OH.
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Clearance Manager Salary Average
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*Data is estimated and depends on the generous anonymous contributions of individuals