Scientific Software Engineer Salary in San Francisco, CA.
Updated on: Jan 28, 2026
How much does a Scientific Software Engineer make in San Francisco, CA?
The average Scientific Software Engineer in San Francisco, CA makes $268,479, 72% above the national average Scientific Software Engineer salary of $156,145. This pay is 31% greater than the combined average salaries of other metroes San Jose, CA, New Orleans, LA, and Los Angeles, CA.
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*Data is estimated and depends on the generous anonymous contributions of individuals